A general bioinformatics toolkit written in Java. This project is in OBF.
It provides a framework for building everything from simple scripts to comples applications using Java. Biojava is designed to be used as a library, so to make it usable we must:
- Design by Interface but provide working implementations so that you can always extend or replace behaviour and implementations.
- Provide extensive API documentation as well as a clear overview of how it all fits together.
- Give simple examples that show how to use the APIs.
The code-base is open source, and we encourage you to modify it or fix bugs, as allowed by the LGPL. Of course, if you wish to change anything major, then you will probably want to discuss it on the mailing list first.
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