ProteinFamily and Domain Database. TransformationalGrammar에서 RegularGrammar에 해당하는 대표적인 DB in ExPASy

Patterns and profiles that help to reliably identify to which known protein family (if any) a new sequence belongs.

http://www.expasy.ch/prosite/

A PROSITE entry includes a sequence pattern for a highly conserved signature motif shared by all or almost all of the members of a protein family.

하나의 엔트리에서 예를 들어 보면, PS00030 이란 패턴을 보면,

• [] : 괄호내 있는것들중 하나

• {} : 괄호내 있는것들 빼고 나머지중 하나
• x : 아무거나 하나

Paper in NucleicAcidsResearch

• PROSITE2002

See also InterWikiForBioinfo, SequenceHomologySearch

CategoryDatabase