A collection of lightweight and handy tools for Python that help to handle various sorts of Proteomics data.

http://pypi.python.org/pypi/pyteomics/1.2.5

It provides

• calculation of basic physico-chemical properties of polypeptides:
  • mass and isotopic distribution
  • charge and pI
  • chromatographic retention time
• access to common proteomics data:

  • MassSpectrometry or LC-MS data

  • FASTA databases

  • search engines output
• easy manipulation of sequences of modified peptides and proteins

CategoryProgram